Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934407.1_cds_XP_016480475.1_71910
CDS Infomation

[gene=LOC107801636] [db_xref=GeneID:107801636] [protein=chitinase domain-containing protein 1-like isoform X2] [protein_id=XP_016480475.1] [location=join(1142..1429,1532..1605,2659..2739,3151..3235,3676..3773,4259..4346,6322..6673,9909..10156)] [gbkey=CDS]
Sequence

ATGGCTAAGAAGCGAAGCAGACAAGGAGGTCCGAGCTCGAGCCACCGGTCCGAAAGAGTC
GAGTCTTCATCCCAGAACCACCGGACCCACGGCTCAGTAAAATCTCACACAAATCGGCAC
CGTTGGCTCACCACCTTCTGCATTCTCTTCGTTGCAATTTTTGTACTTATTTACCGTCAA
AATTACTATTTCTCTACTACTGTTCGTGATGGTGGTGATAGTAACAGACCGTATGTTCAC
CAGCGTGGCCTCGTTAAAACCGATTTAACCTACCGTGAAATTCTCACTGAGAATTCTAAA
GTCTCAGAAAATATAAGTCAGCGGTATTTTAGGAATCCTGTCCTGGCCTACATTACTCCA
TGGAATTCAAAAGGCTATGACCTGGCGAAGAAGTTCAGTTCTAAAATTACACATCTGTCA
CCTGTTTGGTATGAACTGAAGAATGAAGGAAGTAAATTAGTTCTGAATGGAAGACATAAT
GCTGATAGAGGATGGATTTCAGACATTCGAATGAAAGGAAATTCTCTGATTTTACCTAGA
GTTGTCTTGGAGGCAATTCCAGTGGACCTGCTTAAGAAGAAGAGGCTTAGGGAGAAAGCA
ATCAACCTTATCATAACGGAGTGCAAGGAACTGGAGTATGATGGTATTGTGCTTGAATCC
TGGTCAAGATGGGTAGCTTATGGCATCTTGCATGATTCAGATAAGAGAAACATGGCATTA
AAATTTATAAAACAACTTGGAGAAGCTATGCATTCTGTGCACTTAGAAAGGAATGGCAAG
ACAAATCTACAGTTAGTATATGTGATAGGTCCACCACGTACAGATAAGCTGCAGGAGCAT
GATTTTGGACCAGAAGATTTACAAGCTCTGAGTGATGCCGTAGATGGTTTCTCTCTTATG
ACGTATGACTATTCAAGTCCTTATAATCCAGGTCCCAATGCACCTCTGAAGTGGATACGC
TCGACCTTGCATCTTCTTGCCGGTGCTGGCAGCAAAGGTAGGAGATTGGCTGAAAAGATC
TTTGTCGGGATCAACTTCTATGGCAATGATTTTGTCCTGTCAAAAGGTGGGGGGCCTATC
ATATCACACGAATATCTCTCTTTGTTGGAGGAACACAAGCCTTTAATTCAGTGGGAGGAG
GACAGTGCTGAGCATTTCTTCTTGTATTCTGACAATCAGCAAGTCCAGCATGCTGTATTC
TACCCGTCGCTCATGTCACTTGCAGTGCGGCTTGAGGAAGCTCTTTCATGGGGGGCAGGC
ATTTCAATTTGGGAAATTGGTCAAGGTCTGGAATACTTTTTTGATATTTTGTAG

Peptide Sequence

PEP ID

XP_016480475.1
PEP Infomation

PREDICTED: chitinase domain-containing protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MAKKRSRQGGPSSSHRSERVESSSQNHRTHGSVKSHTNRHRWLTTFCILFVAIFVLIYRQ
NYYFSTTVRDGGDSNRPYVHQRGLVKTDLTYREILTENSKVSENISQRYFRNPVLAYITP
WNSKGYDLAKKFSSKITHLSPVWYELKNEGSKLVLNGRHNADRGWISDIRMKGNSLILPR
VVLEAIPVDLLKKKRLREKAINLIITECKELEYDGIVLESWSRWVAYGILHDSDKRNMAL
KFIKQLGEAMHSVHLERNGKTNLQLVYVIGPPRTDKLQEHDFGPEDLQALSDAVDGFSLM
TYDYSSPYNPGPNAPLKWIRSTLHLLAGAGSKGRRLAEKIFVGINFYGNDFVLSKGGGPI
ISHEYLSLLEEHKPLIQWEEDSAEHFFLYSDNQQVQHAVFYPSLMSLAVRLEEALSWGAG
ISIWEIGQGLEYFFDIL

Transcript Sequence

Gene sequence data has not been registered.